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丘成栋 | |
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出生 | 1952年 |
国籍 | 中华人民共和国 |
职业 | 教授 |
基本信息
丘成栋
丘成栋教授在数学、应用数学与控制论、计算机科学、金融数学、生物信息等国际前沿研究领域取得了大量原始创新成果,先后发表两百多篇学术论文,其中包括《PNAS》、《Ann. of Math.》、《Invent. Math.》等等这样的国际顶尖数学刊物。 他解决了复几何和奇点理论中的一些国际著名的猜想。是第一个成功地将李代数用来研究代数几何中的超曲面奇点,如今这个代数被同行称为Yau 代数。 丘成栋教授及他的合作者还解决了非线性滤波理论中的一个中心的问题(解决了Mitter猜想),完全解决了非线性滤波器的理论问题,这对现代工业,包括国防工业将会有深远的影响。 在生物信息方面,他在DNA及蛋白质2维表示法方面的成果发表在世界顶尖杂志《Nuclei Acid Research 》上。 最近,他开创了natural vector方法来表示基因组和蛋白质。
人物简介
丘成栋,男,原籍广东省梅州市蕉岭县,1952年生于香港,曾任美国伊利诺伊大学芝加哥分校数学、统计和计算机科学系特聘教授,该校信息控制实验室主任,IEEE Fellow,国际顶尖数学专业杂志《Journal of Algebraic Geometry》创始人与主编、《Communications in Information and Systems》创始人与主编。
个人成就
2011年6月,著名数学家丘成栋(Stephen Yau)教授辞去美国伊利诺伊大学
芝加哥分校的永久职位,接受[[清华大学邀请,全职到清华大学数学科学系工作。他已来到清华大学并办完入职手续,成为了清华大学的一名正式教授。
此后,丘成栋教授将全身心地投入到清华大学数学学科的发展与建设,为清华大学数学学科的教学科研、学科建设、人才队伍建设和国际合作交流等作出贡献。丘成栋教授1976年获美国纽约州立大学石溪分校博士学位,历任美国普林斯顿高等研究院成员(1976-77),哈佛大学Benjamin Pierce助理教授(1977-80),伊利诺伊大学芝加哥分校数学、统计和计算机科学系副教授(1980-84)、教授(1984-)、特聘教授(2005-)。
他开创了natural vector方法来表示基因组和蛋白质。 如果两个基因组或蛋白质从生物意义上互相接近,那么它们的natural vector具有很近的距离。因此,natural vector方法不仅对基因组和蛋白质提供了快速、唯一的表示,而且成为有力的聚类和预测工具。基于natural vector方法,丘教授计划构造一个基因组数据库和一个蛋白质数据库。与当前的基因组或蛋白质数据库不同,他构造的新的数据库将支持对所有已知的基因组和蛋白质进行同时的比较研究。公共蛋白质数据库记录了当前有超过八百万的蛋白质存在。在如今的方法中,只有natural vector方法可以完成同时比较这个"不可能的任务"。丘教授计划在清华大学组建一个团队来开展这个科研项目。
奖励与荣誉
1. 2013年1月,获美国数学学会Fellow (Fellow of the American Mathematical Society)。
2. 2005年5月,获美国伊利诺伊大学杰出教授 (UIC Distinguished Professor)。
3. 2003年1月,获电气电子工程师学会Fellow (IEEE Fellow)。
4. 2000年9月,获约翰.西蒙.古根海姆奖 (John Simon Guggenheim Fellowship)。
5. 1980年4月,获艾尔弗雷德. P. 斯隆奖 (Alfred P. Sloan Fellowship)。
学术成果
截止2016年3月,已发表论文324篇。其中以清华大学为通讯单位发表的论文有55篇。如下:
- Virus classification in 60-dimensional protein space (with Yongkun Li, Kun Tian, Changchuan Yin and Rong Lucy He), (to appear), Molecular Phylogenetics and Evolution, 2016.
- A New Method for Studying the Evolutionary Origin of the SAR11 Clade Marine Bacteria (with Xin Zhao and Rong Lucy He), (to appear), Molecular Phylogenetics and Evolution, 2016.
- Derivations of the moduli algebras of weighted homogeneous hypersurface singularities (with Huaiqing Zuo), (to appear), Journal of Algebra, 2016.
- Thom-Sebastiani properties of Kohn-Rossi cohomology of compact connected strongly pseudoconvex CR manifolds (with Huaiqing Zuo), (to appear), SCIENCE CHINA Mathematics, 2016.
- A Sharp upper estimate conjecture for the Yau number of weighted homogeneous isolated hypersurface singularity (with HUAI QING ZUO),(to appear), Pure and Applied Mathematics Quarterly, 2016.
- Recent results on rigidity of CR morphisms between compact strongly pseudoconvex CR manifolds (with Huaiqing Zuo), (to appear), Proceedings of ICCM2013, 2016.
- A sharp estimate of positive integral points in 6-dimensional polyhedra and a sharp estimate of smooth numbers (with Andrew Liang and Huaiqing Zuo), SCIENCE CHINA Mathematics, Vol. 59, No. 3 (2016), 425-444.
On the polynomial sharp upper estimate conjecture in 7-dimensional simplex (with Beihui Yuan and Huaiqing Zuo), Journal of Number Theory, Vol. 160 (2016), 254-286.
- On higher dimensional complex Plateau problem (with Rong Du and Yun Gao), Mathematische Zeitschrift, Vol. 282(2016), 389-403.
- Interplay between CR Geometry and Algebraic Geometry (with Huaiqing Zuo), Complex Geometry and Dynamics – Proceedings of the Abel Symposium 2013, NTNU, Trondheim, Norway, July 2-5, 2013, Vol. 10(2015), 227-258.
- On the quenching behavior of the mems with fringing field (with Xue Luo), Quarterly of Applied Mathematics, Vol. 73, No. 4 (2015), 629-659.
- Some Finite Dimensional Filters derived from the Structure Theorem for Five-dimensional Estimation Algebras (with Wen-Lin Chiou and Shaopu Lin), Asian Journal of Math., Vol. 19, No. 5 (2015), 793-810.
- Topological Classification of Simplest Gorenstein Non-complete Intersection Singularities of Dimension 2 (with Mingyi Zhang and Huaiqing Zuo), Asian Journal of Mathematics, Vol. 19, No. 4 (2015), 651-792.
- A Novel Suboptimal Method for Solving Polynomial Filtering Problems (with Xue Luo, Yang Jiao and Wen-Lin Chiou), Automatica, Vol. 62 (2015), 26-31.
- Two dimensional Yau-Hausdorff distance with applications on comparison of DNA and protein sequences (with Kun Tian, Xiaoqian Yang, Qin Kong, Changchuan Yin and Rong L. He), PLoS ONE, 2015, DOI:10.1371/journal.pone.0136577.
Ebolaviruses Classification Based on Natural Vectors (with Hui Zheng, Changchuan Yin, Tung Hoang, Rong Lucy He and Jie Yang), DNA and Cell Biology, Vol. 34, No. 6 (2015), 1-11.
- An improved model for whole genome phylogenetic analysis by Fourier transform (with Changchuan Yin), Journal of Theoretical Biology, Vol. 382 (2015), 99-110.
- Time-dependent Hermite-Galerkin spectral method and its applications (with Xue Luo and Shing Tung Yau), Applied Mathematics and Computation, Vol. 264 (2015), 378-391.
- A new method to cluster DNA sequences using Fourier power spectrum (with Tung Hoang, Changchuan Yin, Hui Zheng, Chenglong Yu and Rong Lucy He), Journal of Theoretical Biology, Vol. 372 (2015), 135-145.
- Plurigenera of compact connected strongly pseudoconvex CR manifolds (with Ke-Pao Lin and Huaiqing Zuo), Science China Mathematics, Vol. 58, No. 3 (2015), 525-530.
- Distinguishing Proteins From Arbitrary Amino Acid Sequences (with Wei-Guang Mao, Max Benson, and Rong Lucy He), Scientific Reports,Vol. 5 (2015), 1-8.
- Complete characterization of isolated homogeneous hypersurface singularities (with Huaiqing Zuo), Pacific Journal of Mathematics, Vol. 273, No. 1 (2015), 213-224.
- On classification of toric surface codes of low dimension (with Xue Luo, Mingyi Zhang and Huaiqing Zuo), Finite Fields and Their Applications, Vol. 33 (2015), 90-102.
- A sharp polynomial estimate of positive integral points in a 4-dimensional tetrahedron and a sharp estimate of the Dickman-de Bruijn function (with Xue luo and Huaiqing Zuo), Mathematische Nachrichten, Vol. 288, No. 1 (2015), 61-75.
- On a number-theoretic conjecture on positive integral points in a 5-dimensional tetrahedron and a sharp estimate of the Dickman-De Bruijn function (with Ke-Pao Lin, Xue Luo, and Huaiqing Zuo), Journal of the European Mathematical Society, Vol. 16 (2014), 1937-1966.
- Global comparison of multiple-segmented viruses in 12-dimensional Genome space (with Hsin-Hsiung Huang, Chenglong Yu, Hui Zheng, Troy Hernandez, Shek-Chung Yau, Rong Lucy He, and Jie Yang), Molecular Phylogenetics and Evolution, Vol. 81 (2014), 29-36.
- K-mer sparse matrix model for genetic sequence and its applications in sequence comparison (with Jia Wen and YuYan Zhang), Journal of Theoretical Biology, Vol. 363 (2014), 145-150.
- A measure of DNA sequence similarity by Fourier Transform with applications on hierarchical clustering (with Changchuan Yin, and Ying Chen), Journal of Theoretical Biology, Vol. 359 (2014), 18-28.
- DFA7, A New Method to Distinguish between Intron-containing and Intronless Genes (with Chenglong Yu, Mo Deng, Lu Zheng, Rong Lucy He, and Jie Yang ), PLoS ONE, Vol. 9, No. 7 (2014), 1-10.
- K-mer natural vector and its application to the phylogenetic analysis of genetic sequences (with Wen Jia, Raymond H.F. Chan, Shek-Chung Yau, Rong L. He), Gene, Vol. 546, No. 1 (2014), 25-34.
- Viral genome phylogeny based on Lempel-Ziv complexity and Hausdorff distance (with Chenglong Yu, Rong Lucy He), Journal of Theoretical Biology, Vol. 348 (2014), 12-20.
- On variance of exponents for isolated surface singularities with modality ≤ 2 (with Huaiqing Zuo), Science China Mathematics, Vol. 57, No. 1 (2014), 31-41.
- Hermite Spectral Method with Hyperbolic Cross Approximations to High-dimensional Parabolic PDEs (with Xue Luo), SIAM J. Numer. Anal., Vol. 51, No. 6 (2013), 3186-3212.
- Hermite spectral method to 1-D forward Kolmogorov equation and its application to nonlinear filtering problems (with Xue Luo), IEEE Transactions on Automatic Control, Vol. 58, No. 10 (2013), 2495-2507.
- Several splitting criteria for vector bundles and reflexive sheaves (with Fei Ye), Pacific Journal of Mathematics, Vol. 266, No. 2 (2013), 449-456.
- Complete real time solution of the general nonlinear filtering problem without memory (with Xue Luo), IEEE Transactions on Automatic Control, Vol. 58, No. 10 (2013), 2563-2578.
- Protein sequence comparison based on K-string dictionary (with Chenglong Yu and Rong L. He), Gene, Vol. 529 (2013), 250-256.
- Nonconstant CR morphisms between compact strongly pseudoconvex CR manifolds and étale convering between resolutions of isolated singularities (with Yu-Chao Tu and Huaiqing Zuo), J. Differential Geometry, Vol. 95 (2013), 337-354.
- Denoising the 3-Base Periodicity Walks of DNA Sequences in Gene Finding (with Changchuan Yin and Dongchul Yoo), Journal of Medical and Bioengineering, Vol. 2, No. 2 (2013), 80-83.
- Real Time Classification of Viruses in 12 Dimensions (with Chenglong Yu, Troy Hernandez, Hui Zheng, Shek-Chung Yau, Hsin-Hsiung Huang, Rong Lucy He, Jie Yang), PLoS One, Vol. 8, No. 5 (2013), 1-10.
- Characterization of isolated complete intersection singularities with C*-action of dimension n≥2 by means of geometric genus and irregularity (with Huaiqing Zuo), Communications in Analysis and Geometry, Vol. 21, No. 3 (2013), 509-526.
- Protein space: A natural method for realizing the nature of protein universe (with Chenglong Yu, Mo Deng, Shiu-Yuen Cheng, Shek-Chung Yau, Rong L. He), Journal of Theoretical Biology, Vol. 318 (2013), 197-204.
- Sharp polynomial estimate of integral points in right-angled simplices (with Linda Zhao), Journal of Number Theory, Vol. 133, No. 2 (2013), 398-425.
- Mitter conjecture and structure theorem for six-dimensional estimation algebras (with Yang Jiao and Wen-Lin Chiou), International Journal of Control, Vol. 86, No. 1 (2013), 146-158.
- Decentralized detection in ad hoc sensor networks with low data rate inter sensor communication (with Lu Zheng, Yingwei Yao, Mo Deng), IEEE Transactions on Information Theory, Vol. 58, No. 5 (2012), 3215-3224.
- A Novel Algorithm to Solve the Robust DMZ Equation in Real Time (with Xue Luo), 51st IEEE Conference on Decision and Control, Maui, Hawaii, Dec. 10-13, (2012), 606-611.
- Lower estimate of milnor number and characterization of isolated homogeneous hypersurface singularities (with Huaiqing Zuo), Pacific J. math., Vol. 260, No. 1 (2012), 245-255.
- Kohn-Rossi cohomology and its application to the complex plateau problem, III, (with Rong Du), J. Differential Geometry, Vol. 90 (2012), 251-266.
- Codes from infinitely near points (with Bruce M. Bennett and Hing Sun Luk), Asian J. Mathematics, Vol. 16, No. 1 (2012), 89-101.
- New invariants for complex manifolds, singularities, and CR manifolds with applications (with Rong Du), Proceeding of ICCM 2010, AMS/IP Studies in Advanced Mathematics, Vol. 51 (2012), 431-445.
- New invariants for complex manifolds and isolated singularities (with Rong Du and Hing Sun Luk), Communications in Analysis and Geometry, Vol. 19, No. 5 (2011), 991-1021.
- Coordinate-free characterization of homogeneous polynomials with isolated singularities (with Irene Chen, Ke-Pao Lin, and Huaiqing Zuo), Communications in analysis and geometry, Vol. 19, No. 4 (2011), 661-704.
- Protein map: An alignment-free sequence comparison method based on various properties of amino acids (with Chenglong Yu, ShiuYuen Cheng, Rong L. He), Gene, Vol. 486 (2011), 110-118.
- A novel clustering method via nucleotide-based Fourier power spectrum analysis (with Bo Zhao and Victor Duan), Journal of Theoretical Biology, Vol. 279 (2011), 83-89.
- A new distribution vector and its application in genome clustering (with Bo Zhao and Rong He), Molecular Phylogenetics and Evolution, Vol. 59 (2011), 438-443.
学生培养情况
- 指导的本科生(2011年至今):
1. 2012年,田昆,杨智宇,张鸣一(论文发表在《Asian Journal of Mathematics》)。
2. 2013年,孔琴,杨晓茜,陈颖(论文发表在《Journal of Theoretical Biology》),王昊。
3. 2014年,毛伟光(论文发表在《Scientific Reports》),贾酥,陈秀琼。
4. 2015年,董晟成,陈楚,赵鑫(论文发表在《Molecular Phylogenetics and Evolution》)。
5. 2016年,汪嘉伟 ,张宇宁,诸子越,陈炳仪。
- 指导的硕士研究生(2011年至今)
1. 袁北彗 (2014)
2. 张鸣一 (2015)
3. 时骥 (2013-至今)
- 指导的博士研究生(2011年至今)
1. 田昆 (2012-至今)
2. 杨智宇 (2012-至今)
3. 陈秀琼 (2014-至今)
4. 李永坤 (2014-至今)
5. 赵鑫 (2015-至今)
6. 董睿 (2015-至今)
7. Naveed Hussain (2015-至今)
8. 陈炳仪 (预计2016秋季入学)
- 指导的博士研究生(已毕业)
1. 俞勇 (1988)
2. Craig Seeley (1988)
3. Yi-Jing Xu (1990)
4. 邱文龄 (1991)
5. 梁志华 (1993)
6. Tan Jiang (1993)
7. Li-Xing Jia (1994)
8. 陈杰 (1994)
9. Amid Rasoulian (1995)
10. Hon-Wing Cheng (1996)
11. 张庆龙 (1996)
12. Guo-Qing Hu (1997)
13. Zhi-Gang Liang (1998)
14. 林克葆 (1999)
15. Xi Wu (2000)
16. Zhe Li (2002)
17. 王学军 (2002)
18. Shao-Bo Wang (2002)
19. Junfeng Ding (2005)
20. 殷长传 (2005)
21. Libin iu (2005)
22. Dongchul Yoo (2005)
23. Jiuhong Tang (2005)
24. Dongmin Cai (2006)
25. Ling Zhou (2007)
26. Peng He (2007)
27. Chaoxiao Lu (2008)
28. 杜荣 (2009)
29. 藏卫田 (2009)
30. Qian Liang (2010)
31. 赵波 (2010)
32. 于成龙 (2010)
33. 邓默 (2011)
34. 叶飞(2011)
35. Eb Armah (2011)
36. 焦洋 (2012)
37. 左怀青 (2012)
38. Troy Antonio Hernandez (co-directed with Jie Yang) (2013)
39. 罗雪 (2013)
40. Hsin-Hsiung Bill Huang (co-directed with Jie Yang) (2014)
41. 郑辉(2015)