古槿查看源代码讨论查看历史

古槿

来自 搜狐 的图片

古槿，清华大学自动化系副教授，主要从事微小RNA(microRNA)及其调控网络，杂生物网络的信息理论与计算分析，计算平台与数据库开发方面的研究。

现任清华大学自动化系党委副书记。

基本信息

人物说明----清华大学自动化系党委副书记

国 籍 ---- 中国

职   业 ---- 教育科研管理工作者

毕业院校----清华大学

学位/学历----博士

任职院校----清华大学

个人简介

清华大学自动化系副教授

生物信息学教育部重点实验室

清华纸估蒸信息国家纸提精实验室生物信息学巩愉杠研究部

教育背景

清华大学自动化系，控制科学与工程，工学博士，2009年

清华大学自动化系，自动化，工学学士，2004年

学术兼职

中国人工智能学会生物信息学与人工生腊探奔浆命专委会常务委员

中国自动化学会青年工作委员会委良漏讲迁员

中国生物工程学会计算生物学与生物漏讲迁信息学专委会委员

BMC Medical Genomics, Associate Editor

研究领域

微小RNA(microRNA)及其调控网络

复胶汽杂生物网络的信息理论与计算分析

计算平台与数据库开发

学术成果

工具软件与数据库

[1] ClustEx: responsive gene module identification package (v0.3)

[2] PCS: de novo k-mer analysis package (v1.5)

[3] Mamm miR-EST: the ESTs mapped to the flanking sequences of miRNAs

期刊论文

[1] Jin Gu, Yang Chen, Shao Li, Yanda Li. Identification of responsive gene modules by network-based gene clustering and extending: application to inflammation and angiogenesis. BMC Systems Biology 2010, 4:47.

[2] Jin Gu. Brief review: frontiers in the computational studies of gene regulations. Frontier of Electrical Electronic Engineering in China 2008, 3(3):251-259.

[3] Xiaowo Wang, Jin Gu, Michael Zhang, Yanda Li. Identification of phylogenetically conserved microRNA cis-regulatory elements across 12 Drosophila species. Bioinformatics 2008, 24(2):165-171.

[4] Tao He, Fei Li, Jin Gu, Ruiqiang Li, Fei Li. Computational Identification of 99 Invertebrate MicroRNAs with Comparative Genomics. Tsinghua Science and Technology 2008, 13(4):425-432.

[5] Jin Gu, Hu Fu, Xuegong Zhang, Yanda Li. Identifications of conserved 7-mers in 3'-UTRs and microRNAs in Drosophila. BMC Bioinformatics 2007, 8:32.

[6] Jin Gu, Tao He, Yunfei Pei, Fei Li, Jing Zhang, Xiaowo Wang, Xuegong Zhang, Yanda Li. Primary Transcripts and Expressions of Mammal Intergenic MicroRNAs Detected by Mapping ESTs to Their Flanking Sequences. Mammalian Genome 2006, 17(10):1033-1041.

[7] Xiaowo Wang, Jing Zhang, Fei Li, Jin Gu, Tao He, Xuegong Zhang, Yanda Li. MicroRNA Identification Based on Sequence and Structure Alignment. Bioinformatics 2005, 21(18):3610-3614.

会议论文与摘要

[1] Dingming Wu, Michael Q Zhang, Jin Gu. A new gene network clustering algorithm based on minimum spanning tree. The 4th Chinese National Bioinformatics and Systems Biology Conference, 2010, Hangzhou. (Poster)

[2] Ting Wang, Jin Gu, Rui Li, Shiwen Zhao, Yanda Li. Defining gene expression adaptive responses regulated by microRNAs and transcription factors in human umbilical vein endothelial cells. Computational Biology 2010, Suzhou Dushu Lake Conference Center. (Abstract & Oral Presentation)

[3] Jin Gu. A multiple-instance scoring method to predict tissue-specific cis-regulatory motifs and regions. The International MultiConference of Engineers and Computer Scientists (IMECS'10) 2010, Vol I:186-190. (Oral Presentation)

[4] Jin Gu, Shao Li, Yang Chen, Yanda Li. Integrative computational identifications of the signaling pathway network related to TNF-alpha stimulus in vascular endothelial cells. International Joint Conference on Bioinformatics, Systems Biology and Intelligent Computing (IJCBS'09) 2009, 422-427. (Oral Presentation)